EnhancerDB
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  3. rs78634022[chr16:89381831]
Enhancers that have rs78634022[chr16:89381831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78634022[chr16:89381831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89381259 89382306 ZNF274 GTRD no Blood (GM12878) 21738063
chr16 89381259 89382306 ZNF274 GTRD no Blood (GM12878) 108225506
chr16 89381299 89383100 ZNF274 GTRD no Bone Marrow (K562) 21738064
chr16 89381299 89383100 ZNF274 GTRD no Bone Marrow (K562) 108225507
chr16 89381299 89383100 ZNF274 GTRD no Bone Marrow (K562) 108225508
chr16 89381602 89382243 ZNF143 GTRD no Epithelial (MCF-7) 21738065
chr16 89381602 89382243 ZNF143 GTRD no Epithelial (MCF-7) 108225509
chr16 89381722 89382251 ZNF274 GTRD no Bone Marrow (K562) 21738066
chr16 89381722 89382251 ZNF274 GTRD no Bone Marrow (K562) 108225510
chr16 89381743 89382241 TCF7L2 GTRD no Colon (HCT116) 21738067
chr16 89381743 89382241 TCF7L2 GTRD no Colon (HCT116) 108225511
Genes associated with rs78634022[chr16:89381831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 683457 Breast 0.350222 15155