EnhancerDB
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  3. rs78635408[chr5:14227570]
Enhancers that have rs78635408[chr5:14227570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14197965 14242825 enh22053
Brain (SK-N-MC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78635408[chr5:14227570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14227551 14227570 RFX2 JASPAR yes 61026528
chr5 14227555 14227571 RFX2 JASPAR yes 61026529
chr5 14227555 14227571 RFX3 JASPAR yes 61026530
chr5 14227555 14227571 RFX4 JASPAR yes 61026531
chr5 14227555 14227571 RFX5 JASPAR yes 61026532
Genes associated with rs78635408[chr5:14227570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More