EnhancerDB
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Enhancers that have rs78647471[chr1:55327144]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 55327144 55327486 vista1670
VISTA
Transcript factors that have rs78647471[chr1:55327144]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55326535 55327151 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805356
chr1 55326759 55327199 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805357
chr1 55326761 55327325 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805358
chr1 55326986 55327376 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805359
chr1 55326990 55327366 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805360
chr1 55327023 55327323 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805361
chr1 55327048 55327418 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805362
chr1 55327049 55327409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805363
chr1 55327072 55327332 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805364
chr1 55327091 55327407 EBF1 UCSC Txn Factor no Conserved 107805365
chr1 55327092 55327368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805366
chr1 55327096 55327432 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805367
chr1 55327098 55327374 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805368
chr1 55327105 55327349 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805369
chr1 55327112 55327382 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805370
chr1 55327124 55327388 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805371
chr1 55327142 55327147 SP1 TRANSFAC yes 29002054
chr1 55327142 55327147 SP1 TRANSFAC yes 118293549
chr1 55327144 55327368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805372
Genes associated with rs78647471[chr1:55327144], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More