EnhancerDB
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  3. rs78679331[chr16:85447082]
Enhancers that have rs78679331[chr16:85447082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs78679331[chr16:85447082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85443552 85447109 TCF7L2 GTRD no Colon (HCT116) 21725249
chr16 85444131 85450088 ZNF143 GTRD no Epithelial (MCF-7) 21725250
chr16 85444136 85449944 ZNF143 GTRD no Epithelial (MCF-7) 21725251
chr16 85444169 85449984 ZNF143 GTRD no Epithelial (MCF-7) 21725252
chr16 85444186 85450103 ZNF143 GTRD no Epithelial (MCF-7) 21725253
chr16 85444186 85450103 ZNF143 GTRD no Epithelial (MCF-7) 108214374
chr16 85445594 85448333 ZNF143 GTRD no Epithelial (MCF-7) 21725255
chr16 85445624 85447233 TCF7L2 GTRD no Colon (HCT116) 21725256
chr16 85445634 85448684 ZNF274 GTRD no Bone Marrow (K562) 21725257
chr16 85446324 85447497 TCF7L2 GTRD no Colon (HCT116) 21725258
chr16 85446654 85447553 ZNF143 GTRD no Epithelial (MCF-7) 21725259
chr16 85446790 85447384 ZNF143 GTRD no Epithelial (MCF-7) 21725260
chr16 85446802 85447246 ZNF274 GTRD no Bone Marrow (K562) 21725261
chr16 85446841 85447238 ZNF143 GTRD no Epithelial (MCF-7) 21725262
chr16 85446849 85448278 ZNF274 GTRD no Bone Marrow (K562) 21725263
chr16 85446897 85450308 ZNF143 GTRD no Epithelial (MCF-7) 21725264
chr16 85446897 85450308 ZNF143 GTRD no Epithelial (MCF-7) 108214375
chr16 85446986 85450220 ZNF274 GTRD no Liver (HepG2) 108214376
chr16 85446991 85448066 ZNF274 GTRD no Bone Marrow (K562) 21725265
chr16 85447068 85449963 ZNF143 GTRD no Epithelial (MCF-7) 21725266
chr16 85447075 85447083 HOXA5 JASPAR yes 12058028
Genes associated with rs78679331[chr16:85447082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More