EnhancerDB
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  3. rs78679969[chr12:53765531]
Enhancers that have rs78679969[chr12:53765531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr12 53765037 53765535 vista13524
VISTA
Transcript factors that have rs78679969[chr12:53765531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53764405 53765639 POLR2A UCSC Txn Factor no Conserved 108035990
chr12 53764859 53765552 ZNF274 GTRD no Bone Marrow (K562) 21549309
chr12 53764859 53765552 ZNF274 GTRD no Bone Marrow (K562) 108036045
chr12 53764916 53765552 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036064
chr12 53765089 53765579 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036126
chr12 53765103 53765559 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036131
chr12 53765108 53765682 ZNF274 GTRD no Bone Marrow (K562) 21549355
chr12 53765108 53765682 ZNF274 GTRD no Bone Marrow (K562) 108036134
chr12 53765134 53765554 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036140
chr12 53765138 53765614 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549357
chr12 53765138 53765614 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036141
chr12 53765161 53765571 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036144
chr12 53765169 53765605 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036145
chr12 53765243 53765588 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549361
chr12 53765243 53765588 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036150
chr12 53765272 53765534 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036151
chr12 53765302 53765797 ZNF274 GTRD no Bone Marrow (K562) 21549362
chr12 53765302 53765797 ZNF274 GTRD no Bone Marrow (K562) 108036152
chr12 53765313 53765617 STAT3 UCSC Txn Factor no Conserved 108036153
chr12 53765361 53765696 ZNF274 GTRD no Bone Marrow (K562) 21549363
chr12 53765361 53765696 ZNF274 GTRD no Bone Marrow (K562) 108036154
chr12 53765447 53765687 ZNF274 GTRD no Bone Marrow (K562) 21549364
chr12 53765447 53765687 ZNF274 GTRD no Bone Marrow (K562) 108036155
Genes associated with rs78679969[chr12:53765531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More