EnhancerDB
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  3. rs78680565[chr17:57713212]
Enhancers that have rs78680565[chr17:57713212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57699645 57721455 enh4504
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78680565[chr17:57713212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57713204 57713222 NFYA JASPAR yes 55073098
Genes associated with rs78680565[chr17:57713212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 57784553 57919616 + VMP1 ENSG00000062716.6 57784553 71341 Esophagus 0.134895 16106