EnhancerDB
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  3. rs78681289[chr1:155860611]
Enhancers that have rs78681289[chr1:155860611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs78681289[chr1:155860611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155858797 155861096 STAT3 GTRD no Blood (OCI-LY7) 21341683
chr1 155859228 155860639 TCF7L2 GTRD no Colon (HCT116) 21341717
chr1 155859717 155860936 TCF7L2 GTRD no Colon (HCT116) 21341726
chr1 155859782 155860793 ZNF143 GTRD no Epithelial (MCF-7) 21341727
chr1 155859923 155860843 TCF7L2 GTRD no Colon (HCT116) 21341728
chr1 155860023 155860639 TCF7L2 GTRD no Colon (HCT116) 21341729
chr1 155860209 155860730 ZNF274 GTRD no Liver (HepG2) 21341730
chr1 155860249 155860917 ZNF274 GTRD no Liver (HepG2) 21341731
chr1 155860277 155860975 ZNF274 GTRD no Liver (HepG2) 21341732
chr1 155860295 155860862 ZNF274 GTRD no Liver (HepG2) 21341733
chr1 155860427 155860765 ZNF274 GTRD no Liver (HepG2) 21341734
chr1 155860433 155860746 ZNF274 GTRD no Liver (HepG2) 21341735
chr1 155860474 155860868 ZNF274 GTRD no Liver (HepG2) 21341736
chr1 155860596 155860611 MEF2C JASPAR yes 32366110
chr1 155860598 155860618 RREB1 JASPAR yes 32366111
chr1 155860602 155860614 FOXI1 JASPAR yes 32366114
chr1 155860602 155860617 FOXP1 JASPAR yes 32366115
chr1 155860603 155860623 RREB1 JASPAR yes 32366116
chr1 155860605 155860620 FOXA1 JASPAR yes 32366117
chr1 155860606 155860618 FOXI1 JASPAR yes 32366118
chr1 155860606 155860621 FOXP1 JASPAR yes 32366119
chr1 155860606 155860626 RREB1 JASPAR yes 32366120
chr1 155860607 155860619 FOXC2 JASPAR yes 32366121
chr1 155860609 155860620 FOXA1 JASPAR yes 32366122
chr1 155860610 155860625 FOXP1 JASPAR yes 32366123
chr1 155860611 155860622 FOXP2 JASPAR yes 32366124
chr1 155860611 155860631 RREB1 JASPAR yes 32366125
chr1 155860611 155860632 IRF1 JASPAR yes 32366126
Genes associated with rs78681289[chr1:155860611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More