EnhancerDB
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  3. rs78685770[chr6:35571472]
Enhancers that have rs78685770[chr6:35571472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78685770[chr6:35571472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35571454 35571472 NR3C1 JASPAR yes 101294389
chr6 35571462 35571477 FOXP1 JASPAR yes 101294390
chr6 35571463 35571474 FOXP2 JASPAR yes 101294391
chr6 35571465 35571476 FOXA1 JASPAR yes 101294392
chr6 35571466 35571487 IRF1 JASPAR yes 101294393
chr6 35571468 35571483 PRDM1 JASPAR yes 101294394
chr6 35571468 35571483 STAT2 JASPAR yes 101294395
chr6 35571469 35571483 SPIC JASPAR yes 101294396
chr6 35571469 35571483 STAT1 JASPAR yes 101294397
Genes associated with rs78685770[chr6:35571472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More