EnhancerDB
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  3. rs78697227[chr1:52024295]
Enhancers that have rs78697227[chr1:52024295]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs78697227[chr1:52024295]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52024283 52024298 NFYB JASPAR yes 28850446
chr1 52024285 52024301 NFYA JASPAR yes 28850447
chr1 52024286 52024304 NFYA JASPAR yes 28850448
chr1 52024294 52024300 NFIC JASPAR yes 28850452
chr1 52024295 52024306 NFKB1 JASPAR yes 28850453
Genes associated with rs78697227[chr1:52024295], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More