EnhancerDB
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  3. rs78708600[chr1:212105699]
Enhancers that have rs78708600[chr1:212105699]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs78708600[chr1:212105699]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212105180 212106902 ZNF274 GTRD no Bone Marrow (K562) 21377716
chr1 212105636 212105912 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377717
chr1 212105684 212105699 FOXP1 JASPAR yes 35093238
chr1 212105685 212105700 FOXP1 JASPAR yes 35093240
chr1 212105685 212105706 IRF1 JASPAR yes 35093241
chr1 212105686 212105701 FOXP1 JASPAR yes 35093242
chr1 212105686 212105707 IRF1 JASPAR yes 35093243
chr1 212105687 212105702 FOXP1 JASPAR yes 35093244
chr1 212105689 212105704 FOXP1 JASPAR yes 35093245
chr1 212105689 212105710 IRF1 JASPAR yes 35093246
chr1 212105693 212105707 SPI1 JASPAR yes 35093247
Genes associated with rs78708600[chr1:212105699], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More