EnhancerDB
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  3. rs78772333[chr1:10445456]
Enhancers that have rs78772333[chr1:10445456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10444465 10451875 enh57
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs78772333[chr1:10445456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10445447 10445462 TFAP2A JASPAR yes 26714073
chr1 10445449 10445462 TFAP2A JASPAR yes 26714074
chr1 10445449 10445462 TFAP2B JASPAR yes 26714075
chr1 10445449 10445462 TFAP2C JASPAR yes 26714076
chr1 10445449 10445464 TFAP2C JASPAR yes 26714077
chr1 10445450 10445462 TFAP2A JASPAR yes 26714078
chr1 10445450 10445462 TFAP2B JASPAR yes 26714079
chr1 10445450 10445462 TFAP2C JASPAR yes 26714080
Genes associated with rs78772333[chr1:10445456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More