EnhancerDB
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  3. rs78775554[chr1:226994910]
Enhancers that have rs78775554[chr1:226994910]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78775554[chr1:226994910]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226993939 226994992 ZNF274 GTRD no Bone Marrow (K562) 21387583
chr1 226994459 226995504 TCF7L2 GTRD no Colon (HCT116) 21387586
chr1 226994648 226995366 TCF7L2 GTRD no Colon (HCT116) 21387587
chr1 226994747 226996532 ZNF274 GTRD no Blood (GM12878) 21387588
chr1 226994862 226995264 ZNF143 GTRD no Epithelial (MCF-7) 21387589
chr1 226994902 226994912 SP1 JASPAR yes 35846199
Genes associated with rs78775554[chr1:226994910], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More