EnhancerDB
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  3. rs78775871[chr12:53274127]
Enhancers that have rs78775871[chr12:53274127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs78775871[chr12:53274127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53273077 53274184 POLR2A UCSC Txn Factor no Conserved 108034809
chr12 53273534 53274190 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548027
chr12 53274055 53274475 ZNF274 GTRD no Cervix (HeLa-S3) 21548054
chr12 53274075 53274477 ZNF274 GTRD no Liver (HepG2) 21548055
chr12 53274091 53274306 ZNF274 GTRD no Bone Marrow (K562) 21548056
chr12 53274093 53274306 ZNF274 GTRD no Bone Marrow (K562) 21548057
chr12 53274096 53274363 ZNF274 GTRD no Bone Marrow (K562) 21548058
chr12 53274110 53274567 ZNF274 GTRD no Cervix (HeLa-S3) 21548059
chr12 53274127 53274147 PPARG JASPAR yes 120958525
Genes associated with rs78775871[chr12:53274127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More