EnhancerDB
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  3. rs78796341[chr1:94792465]
Enhancers that have rs78796341[chr1:94792465]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94779785 94813175 enh12071
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78796341[chr1:94792465]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94792158 94793192 ZNF274 GTRD no Blood (GM12878) 107815560
chr1 94792177 94792843 ZNF143 GTRD no Epithelial (MCF-7) 107815561
chr1 94792231 94793361 ZNF274 GTRD no Blood (GM12878) 107815562
chr1 94792250 94792949 ZNF274 GTRD no Cervix (HeLa-S3) 107815563
chr1 94792272 94793230 ZNF274 GTRD no Blood (GM12878) 107815564
chr1 94792285 94793101 ZNF274 GTRD no Blood (GM12878) 107815565
chr1 94792290 94793039 ZBTB33 GTRD no Lung (A549) 107815566
chr1 94792321 94793359 ZBTB33 GTRD no Brain (SK-N-SH) 107815567
chr1 94792323 94793575 ZBTB33 GTRD no Brain (SK-N-SH) 107815568
chr1 94792336 94792940 ZNF274 GTRD no Blood (GM12878) 107815569
chr1 94792337 94792927 ZBTB33 GTRD no Lung (A549) 107815570
chr1 94792345 94793317 ZBTB33 GTRD no Brain (SK-N-SH) 107815571
chr1 94792357 94793079 ZNF274 GTRD no Blood (GM12878) 107815572
chr1 94792362 94793575 ZBTB33 GTRD no Brain (SK-N-SH) 107815573
chr1 94792363 94792851 ZNF274 GTRD no Cervix (HeLa-S3) 107815574
chr1 94792379 94792956 ZNF274 GTRD no Blood (GM12878) 107815575
chr1 94792391 94793734 ZNF274 GTRD no Cervix (HeLa-S3) 107815576
chr1 94792405 94792928 ZNF274 GTRD no Blood (GM12878) 107815577
chr1 94792426 94792940 ZNF274 GTRD no Cervix (HeLa-S3) 107815578
chr1 94792434 94792959 ZNF274 GTRD no Blood (GM12878) 107815579
chr1 94792439 94792927 ZNF274 GTRD no Blood (GM12878) 107815580
chr1 94792452 94793021 ZNF274 GTRD no Blood (GM12878) 107815581
chr1 94792456 94792476 TP53 JASPAR yes 30873673
chr1 94792458 94792838 ZNF274 GTRD no Cervix (HeLa-S3) 107815582
chr1 94792461 94792465 YY1 TRANSFAC yes 30873674
Genes associated with rs78796341[chr1:94792465], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More