EnhancerDB
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  3. rs78852415[chr1:40360257]
Enhancers that have rs78852415[chr1:40360257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40355693 40361095 enh11768
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78852415[chr1:40360257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40360247 40360263 POU4F2 JASPAR yes 28299811
chr1 40360247 40360263 POU4F3 JASPAR yes 28299812
chr1 40360248 40360258 PAX7 JASPAR yes 28299813
chr1 40360249 40360263 POU4F1 JASPAR yes 28299815
chr1 40360250 40360260 EMX1 JASPAR yes 28299816
chr1 40360250 40360260 EMX2 JASPAR yes 28299817
chr1 40360250 40360260 GSX1 JASPAR yes 28299818
chr1 40360250 40360260 LHX2 JASPAR yes 28299819
chr1 40360250 40360260 LHX6 JASPAR yes 28299820
chr1 40360250 40360260 MIXL1 JASPAR yes 28299821
chr1 40360250 40360260 MNX1 JASPAR yes 28299822
chr1 40360250 40360260 NOTO JASPAR yes 28299823
chr1 40360250 40360260 POU6F1 JASPAR yes 28299824
chr1 40360250 40360260 RAX JASPAR yes 28299825
chr1 40360251 40360259 ISX JASPAR yes 28299826
chr1 40360251 40360259 LMX1A JASPAR yes 28299827
chr1 40360251 40360259 LMX1B JASPAR yes 28299828
chr1 40360251 40360259 NKX6-1 JASPAR yes 28299829
chr1 40360251 40360259 NKX6-2 JASPAR yes 28299830
chr1 40360251 40360259 PRRX1 JASPAR yes 28299831
chr1 40360251 40360259 RAX2 JASPAR yes 28299832
chr1 40360251 40360259 SHOX JASPAR yes 28299833
chr1 40360251 40360259 UNCX JASPAR yes 28299834
chr1 40360251 40360259 VAX1 JASPAR yes 28299835
chr1 40360256 40360269 ELF1 JASPAR yes 28299836
Genes associated with rs78852415[chr1:40360257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More