EnhancerDB
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  3. rs78856743[chr12:123619648]
Enhancers that have rs78856743[chr12:123619648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123594465 123621595 enh15080
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr12 123619465 123619743 vista15238
VISTA
Transcript factors that have rs78856743[chr12:123619648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123619640 123619651 NFKB1 JASPAR yes 82493259
chr12 123619640 123619651 NFKB1 JASPAR yes 124322630
chr12 123619641 123619651 REL JASPAR yes 82493260
chr12 123619641 123619651 REL JASPAR yes 124322631
chr12 123619645 123619650 SP1 TRANSFAC yes 82493261
chr12 123619645 123619650 SP1 TRANSFAC yes 124322632
Genes associated with rs78856743[chr12:123619648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 122652285 122688018 + LRRC43 ENSG00000158113.8 122652285 931630 Uterus 0.394333 12639