EnhancerDB
  1. Home
  2. SNP
  3. rs78858033[chr1:229546949]
Enhancers that have rs78858033[chr1:229546949]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229540746 229550075 enh12766
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 229546837 229547142 vista5472
VISTA
Transcript factors that have rs78858033[chr1:229546949]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229546809 229547219 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878150
chr1 229546822 229547218 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878151
chr1 229546904 229547134 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878152
chr1 229546909 229547125 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878153
chr1 229546939 229546949 HMBOX1 JASPAR yes 35987224
chr1 229546939 229546949 HMBOX1 JASPAR yes 118476664
chr1 229546942 229546953 HOXC13 JASPAR yes 35987225
chr1 229546942 229546953 HOXC13 JASPAR yes 118476665
Genes associated with rs78858033[chr1:229546949], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More