EnhancerDB
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Enhancers that have rs78876447[chr17:39812406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs78876447[chr17:39812406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39811353 39812759 ZNF274 GTRD no Blood (GM12878) 108259221
chr17 39811851 39812501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758067
chr17 39811851 39812501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259226
chr17 39812100 39812953 ZNF143 GTRD no Epithelial (MCF-7) 21758073
chr17 39812100 39812953 ZNF143 GTRD no Epithelial (MCF-7) 108259234
chr17 39812104 39813037 ZNF143 GTRD no Epithelial (MCF-7) 21758074
chr17 39812104 39813037 ZNF143 GTRD no Epithelial (MCF-7) 108259235
chr17 39812141 39813002 ZNF143 GTRD no Epithelial (MCF-7) 21758075
chr17 39812141 39813002 ZNF143 GTRD no Epithelial (MCF-7) 108259236
chr17 39812165 39813091 ZNF143 GTRD no Epithelial (MCF-7) 21758076
chr17 39812165 39813091 ZNF143 GTRD no Epithelial (MCF-7) 108259237
chr17 39812183 39813163 ZNF143 GTRD no Epithelial (MCF-7) 21758077
chr17 39812183 39813163 ZNF143 GTRD no Epithelial (MCF-7) 108259238
chr17 39812186 39813077 ZNF143 GTRD no Epithelial (MCF-7) 21758078
chr17 39812186 39813077 ZNF143 GTRD no Epithelial (MCF-7) 108259239
chr17 39812190 39813170 ZNF143 GTRD no Epithelial (MCF-7) 21758079
chr17 39812190 39813170 ZNF143 GTRD no Epithelial (MCF-7) 108259240
chr17 39812221 39813019 ZNF143 GTRD no Epithelial (MCF-7) 21758080
chr17 39812221 39813019 ZNF143 GTRD no Epithelial (MCF-7) 108259241
chr17 39812227 39813135 ZNF143 GTRD no Epithelial (MCF-7) 21758081
chr17 39812227 39813135 ZNF143 GTRD no Epithelial (MCF-7) 108259242
chr17 39812394 39812408 E2F7 JASPAR yes 54269174
Genes associated with rs78876447[chr17:39812406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More