EnhancerDB
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  3. rs78884944[chr19:12895954]
Enhancers that have rs78884944[chr19:12895954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12895349 12896178 vista28655
VISTA
Transcript factors that have rs78884944[chr19:12895954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12895183 12896060 POLR2A UCSC Txn Factor no Conserved 108386337
chr19 12895183 12896060 POLR2A UCSC Txn Factor no Conserved 108386338
chr19 12895311 12896196 MYC UCSC Txn Factor no Conserved 108386349
chr19 12895311 12896196 MYC UCSC Txn Factor no Conserved 108386350
chr19 12895336 12896006 GATA2 UCSC Txn Factor no Conserved 108386358
chr19 12895382 12896026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386372
chr19 12895425 12895981 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386383
chr19 12895456 12896006 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386387
chr19 12895551 12895955 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386390
chr19 12895596 12896196 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386391
chr19 12895856 12896256 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386392
chr19 12895912 12896348 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386393
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386394
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386395
chr19 12895913 12897618 ZNF143 GTRD no Epithelial (MCF-7) 108386396
chr19 12895929 12896383 RUNX3 UCSC Txn Factor no Conserved 108386397
chr19 12895929 12896383 RUNX3 UCSC Txn Factor no Conserved 108386398
chr19 12895929 12896383 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386399
chr19 12895929 12896383 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386400
chr19 12895948 12895958 MSC JASPAR yes 70806159
chr19 12895948 12895958 MSC JASPAR yes 112493820
chr19 12895948 12895960 GRHL1 JASPAR yes 70806160
chr19 12895948 12895960 GRHL1 JASPAR yes 112493821
chr19 12895950 12895965 FOXA1 JASPAR yes 70806161
chr19 12895950 12895965 FOXA1 JASPAR yes 112493822
chr19 12895951 12895957 PTF TRANSFAC yes 70806162
chr19 12895951 12895957 PTF TRANSFAC yes 112493823
chr19 12895954 12895965 FOXA1 JASPAR yes 70806163
chr19 12895954 12895965 FOXA1 JASPAR yes 112493824
Genes associated with rs78884944[chr19:12895954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More