EnhancerDB
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  3. rs78892143[chr3:56885104]
Enhancers that have rs78892143[chr3:56885104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs78892143[chr3:56885104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56885099 56885118 CTCF JASPAR yes 2603363
chr3 56885103 56885108 USF2 TRANSFAC yes 2603364
chr3 56885103 56885117 PLAG1 JASPAR yes 2603365
Genes associated with rs78892143[chr3:56885104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More