EnhancerDB
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  3. rs78901820[chr17:38687430]
Enhancers that have rs78901820[chr17:38687430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78901820[chr17:38687430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38687115 38687896 ZNF274 GTRD no Bone Marrow (K562) 21754991
chr17 38687337 38687717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21754992
chr17 38687424 38687435 TFAP2A JASPAR yes 54222379
chr17 38687424 38687435 TFAP2C JASPAR yes 54222380
chr17 38687426 38687620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21754993
Genes associated with rs78901820[chr17:38687430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More