EnhancerDB
  1. Home
  2. SNP
  3. rs78934212[chr1:212089536]
Enhancers that have rs78934212[chr1:212089536]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs78934212[chr1:212089536]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212088998 212090496 ZNF274 GTRD no Blood (GM12878) 21377511
chr1 212089084 212090334 ZNF274 GTRD no Blood (GM12878) 21377512
chr1 212089258 212090315 ZNF274 GTRD no Blood (GM12878) 21377513
chr1 212089292 212090079 ZNF274 GTRD no Bone Marrow (K562) 21377514
chr1 212089355 212090185 ZNF274 GTRD no Blood (GM12878) 21377515
chr1 212089355 212090194 ZNF274 GTRD no Blood (GM12878) 21377516
chr1 212089395 212090141 ZNF274 GTRD no Blood (GM12878) 21377517
chr1 212089401 212090037 ZNF274 GTRD no Bone Marrow (K562) 21377518
chr1 212089410 212090104 ZNF274 GTRD no Blood (GM12878) 21377519
chr1 212089410 212090302 ZNF274 GTRD no Blood (GM12878) 21377520
chr1 212089443 212089999 ZNF274 GTRD no Blood (GM12878) 21377521
chr1 212089471 212089927 ZNF274 GTRD no Bone Marrow (K562) 21377522
chr1 212089479 212089954 ZNF274 GTRD no Blood (GM12878) 21377523
chr1 212089488 212089883 ZNF274 GTRD no Bone Marrow (K562) 21377524
chr1 212089495 212090030 ZNF274 GTRD no Blood (GM12878) 21377525
chr1 212089521 212090027 ZNF274 GTRD no Blood (GM12878) 21377526
chr1 212089526 212089541 LEF1 JASPAR yes 35090891
chr1 212089532 212090095 ZNF274 GTRD no Blood (GM12878) 21377527
Genes associated with rs78934212[chr1:212089536], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 212458879 212535200 + PPP2R5A ENSG00000066027.7 212458879 369343 Esophagus 0.105833 1825