Enhancers that have rs78946539[chr1:13921500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 13913549 13922282 enh26536

Transcript factors that have rs78946539[chr1:13921500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 13921486 13921501 FOXP1 JASPAR yes 26852043
chr1 13921487 13921502 FOXP1 JASPAR yes 26852044
chr1 13921488 13921503 FOXP1 JASPAR yes 26852045
chr1 13921488 13921509 IRF1 JASPAR yes 26852046
chr1 13921489 13921504 FOXP1 JASPAR yes 26852047
chr1 13921491 13921506 FOXP1 JASPAR yes 26852048
chr1 13921492 13921513 IRF1 JASPAR yes 26852049
chr1 13921493 13921508 FOXP1 JASPAR yes 26852050
chr1 13921496 13921510 SPIC JASPAR yes 26852051
chr1 13921496 13921510 STAT1 JASPAR yes 26852052
chr1 13921496 13921511 PRDM1 JASPAR yes 26852053
chr1 13921496 13921511 STAT2 JASPAR yes 26852054
chr1 13921496 13921517 IRF1 JASPAR yes 26852055
chr1 13921498 13921519 IRF1 JASPAR yes 26852056
chr1 13921500 13921521 IRF1 JASPAR yes 26852057

Genes associated with rs78946539[chr1:13921500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More