EnhancerDB
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  3. rs78948372[chr15:39502440]
Enhancers that have rs78948372[chr15:39502440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs78948372[chr15:39502440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39501583 39503390 P63 GTRD no Skin (Keratinocyte) 21648261
chr15 39501583 39503489 P63 GTRD no Skin (Keratinocyte) 21648262
chr15 39501592 39502507 P63 GTRD no Skin (Keratinocyte) 21648264
chr15 39502429 39502441 PKNOX1 JASPAR yes 22865122
chr15 39502429 39502441 TGIF1 JASPAR yes 22865123
chr15 39502429 39502441 TGIF2 JASPAR yes 22865124
chr15 39502432 39502442 TBX21 JASPAR yes 22865125
chr15 39502432 39502443 TBX20 JASPAR yes 22865126
chr15 39502432 39502443 TBX2 JASPAR yes 22865127
chr15 39502432 39502445 EOMES JASPAR yes 22865128
chr15 39502433 39502441 TBX15 JASPAR yes 22865129
chr15 39502433 39502441 TBX1 JASPAR yes 22865130
chr15 39502433 39502441 TBX4 JASPAR yes 22865131
chr15 39502433 39502441 TBX5 JASPAR yes 22865132
chr15 39502433 39502443 TBR1 JASPAR yes 22865133
Genes associated with rs78948372[chr15:39502440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More