EnhancerDB
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  3. rs78966658[chr2:28942082]
Enhancers that have rs78966658[chr2:28942082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs78966658[chr2:28942082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28942079 28942089 GCM2 JASPAR yes 72673412
chr2 28942079 28942090 GCM1 JASPAR yes 72673413
chr2 28942081 28942090 THAP1 JASPAR yes 72673414
Genes associated with rs78966658[chr2:28942082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More