EnhancerDB
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  3. rs78972297[chr17:55617915]
Enhancers that have rs78972297[chr17:55617915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78972297[chr17:55617915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55617910 55617921 PHOX2A JASPAR yes 54966591
chr17 55617915 55617932 RARA JASPAR yes 54966592
chr17 55617915 55617932 RXRA JASPAR yes 54966593
Genes associated with rs78972297[chr17:55617915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More