EnhancerDB
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  3. rs78986490[chr11:72454546]
Enhancers that have rs78986490[chr11:72454546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 72444521 72462512 enh1866
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78986490[chr11:72454546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 72454279 72455586 ZBTB33 GTRD no Lung (A549) 107988658
chr11 72454279 72455586 ZBTB33 GTRD no Lung (A549) 107988659
chr11 72454359 72455441 ZNF143 GTRD no Epithelial (MCF-7) 107988660
chr11 72454359 72455441 ZNF143 GTRD no Epithelial (MCF-7) 107988661
chr11 72454384 72455615 ZNF274 GTRD no Bone Marrow (K562) 21501994
chr11 72454384 72455615 ZNF274 GTRD no Bone Marrow (K562) 107988662
chr11 72454384 72455615 ZNF274 GTRD no Bone Marrow (K562) 107988663
chr11 72454412 72455293 ZNF143 GTRD no Epithelial (MCF-7) 107988664
chr11 72454412 72455293 ZNF143 GTRD no Epithelial (MCF-7) 107988665
chr11 72454414 72455280 ZBTB33 GTRD no Lung (A549) 107988666
chr11 72454414 72455280 ZBTB33 GTRD no Lung (A549) 107988667
chr11 72454442 72455629 ZBTB33 GTRD no Lung (A549) 107988668
chr11 72454442 72455629 ZBTB33 GTRD no Lung (A549) 107988669
chr11 72454446 72455430 ZNF274 GTRD no Bone Marrow (K562) 21501995
chr11 72454446 72455430 ZNF274 GTRD no Bone Marrow (K562) 107988670
chr11 72454446 72455430 ZNF274 GTRD no Bone Marrow (K562) 107988671
chr11 72454496 72455495 ZNF143 GTRD no Epithelial (MCF-7) 107988672
chr11 72454496 72455495 ZNF143 GTRD no Epithelial (MCF-7) 107988673
chr11 72454501 72455462 ZNF143 GTRD no Epithelial (MCF-7) 107988674
chr11 72454501 72455462 ZNF143 GTRD no Epithelial (MCF-7) 107988675
chr11 72454532 72455403 ZNF274 GTRD no Cervix (HeLa-S3) 21501996
chr11 72454532 72455403 ZNF274 GTRD no Cervix (HeLa-S3) 107988676
chr11 72454532 72455403 ZNF274 GTRD no Cervix (HeLa-S3) 107988677
chr11 72454537 72454552 HNF4A JASPAR yes 39701023
chr11 72454538 72454553 HNF4G JASPAR yes 39701024
chr11 72454546 72454550 ESR1 TRANSFAC yes 39701025
chr11 72454546 72454866 ZNF274 GTRD no Bone Marrow (K562) 21501997
chr11 72454546 72454866 ZNF274 GTRD no Bone Marrow (K562) 107988678
Genes associated with rs78986490[chr11:72454546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More