EnhancerDB
  1. Home
  2. SNP
  3. rs78993221[chr6:139459112]
Enhancers that have rs78993221[chr6:139459112]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139453205 139487395 enh9385
Skin (Keratinocyte) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs78993221[chr6:139459112]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139459106 139459116 HOXC10 JASPAR yes 105767455
chr6 139459106 139459116 HOXD11 JASPAR yes 105767456
chr6 139459106 139459117 HOXC11 JASPAR yes 105767457
chr6 139459106 139459117 HOXC13 JASPAR yes 105767458
chr6 139459106 139459117 HOXD12 JASPAR yes 105767459
chr6 139459107 139459116 CDX1 JASPAR yes 105767460
Genes associated with rs78993221[chr6:139459112], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More