EnhancerDB
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  3. rs78997534[chr17:78763223]
Enhancers that have rs78997534[chr17:78763223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs78997534[chr17:78763223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78762994 78763590 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108307597
chr17 78763156 78763660 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797333
chr17 78763156 78763660 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108307598
chr17 78763222 78763228 NFIC JASPAR yes 56279918
Genes associated with rs78997534[chr17:78763223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More