EnhancerDB
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  3. rs79011483[chr19:10852708]
Enhancers that have rs79011483[chr19:10852708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79011483[chr19:10852708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10852695 10852710 FOXP1 JASPAR yes 112434660
chr19 10852700 10852714 PAX6 JASPAR yes 112434661
chr19 10852702 10852714 PBX1 JASPAR yes 112434662
Genes associated with rs79011483[chr19:10852708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 10713133 10755235 + SLC44A2 ENSG00000129353.10 10713133 97473 Esophagus 1.14135e-08 17018