EnhancerDB
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  3. rs79041284[chr17:78772140]
Enhancers that have rs79041284[chr17:78772140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs79041284[chr17:78772140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78772123 78772142 PAX5 JASPAR yes 56281181
chr17 78772126 78772143 PAX1 JASPAR yes 56281183
chr17 78772126 78772143 PAX9 JASPAR yes 56281184
chr17 78772128 78772142 PAX6 JASPAR yes 56281185
chr17 78772134 78772140 ATF1 TRANSFAC yes 56281186
chr17 78772138 78772153 ZIC4 JASPAR yes 56281187
chr17 78772139 78772153 ZIC1 JASPAR yes 56281188
Genes associated with rs79041284[chr17:78772140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More