EnhancerDB
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  3. rs79062549[chr3:149101953]
Enhancers that have rs79062549[chr3:149101953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
Transcript factors that have rs79062549[chr3:149101953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149101948 149101962 RORA JASPAR yes 6488663
chr3 149101952 149101962 ALX3 JASPAR yes 6488664
chr3 149101952 149101962 ESX1 JASPAR yes 6488665
chr3 149101952 149101962 GSX1 JASPAR yes 6488666
chr3 149101952 149101962 GSX2 JASPAR yes 6488667
chr3 149101952 149101962 LBX2 JASPAR yes 6488668
chr3 149101952 149101962 MIXL1 JASPAR yes 6488669
chr3 149101952 149101962 RAX JASPAR yes 6488670
chr3 149101953 149101957 H1TF2 TRANSFAC yes 6488671
chr3 149101953 149101957 NFE TRANSFAC yes 6488672
chr3 149101953 149101957 SRF TRANSFAC yes 6488673
chr3 149101953 149101961 BARX1 JASPAR yes 6488674
chr3 149101953 149101961 BSX JASPAR yes 6488675
chr3 149101953 149101961 DLX6 JASPAR yes 6488676
chr3 149101953 149101961 ISX JASPAR yes 6488677
chr3 149101953 149101961 LBX1 JASPAR yes 6488678
chr3 149101953 149101961 LHX9 JASPAR yes 6488679
chr3 149101953 149101961 MSX1 JASPAR yes 6488680
chr3 149101953 149101961 MSX2 JASPAR yes 6488681
chr3 149101953 149101961 NKX6-2 JASPAR yes 6488682
chr3 149101953 149101961 PRRX1 JASPAR yes 6488683
chr3 149101953 149101961 RAX2 JASPAR yes 6488684
chr3 149101953 149101961 SHOX JASPAR yes 6488685
chr3 149101953 149101961 UNCX JASPAR yes 6488686
chr3 149101953 149101963 HOXA13 JASPAR yes 6488687
chr3 149101953 149101963 HOXB13 JASPAR yes 6488688
chr3 149101953 149101963 HOXD13 JASPAR yes 6488689
Genes associated with rs79062549[chr3:149101953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More