EnhancerDB
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  3. rs79170299[chr3:57957655]
Enhancers that have rs79170299[chr3:57957655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79170299[chr3:57957655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57957653 57957664 HOXC13 JASPAR yes 2659051
chr3 57957653 57957664 HOXD12 JASPAR yes 2659052
chr3 57957654 57957663 CDX1 JASPAR yes 2659053
chr3 57957654 57957664 HOXA13 JASPAR yes 2659054
chr3 57957654 57957664 HOXB13 JASPAR yes 2659055
chr3 57957654 57957664 HOXC10 JASPAR yes 2659056
chr3 57957654 57957664 HOXD11 JASPAR yes 2659057
chr3 57957654 57957664 HOXD13 JASPAR yes 2659058
Genes associated with rs79170299[chr3:57957655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More