EnhancerDB
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  3. rs79209499[chr3:57972378]
Enhancers that have rs79209499[chr3:57972378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79209499[chr3:57972378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57972359 57972379 RREB1 JASPAR yes 2661144
chr3 57972360 57972380 RREB1 JASPAR yes 2661145
chr3 57972363 57972378 FOXP1 JASPAR yes 2661148
chr3 57972363 57972383 RREB1 JASPAR yes 2661149
chr3 57972364 57972384 RREB1 JASPAR yes 2661150
chr3 57972367 57972379 FOXI1 JASPAR yes 2661151
chr3 57972368 57972388 RREB1 JASPAR yes 2661152
chr3 57972370 57972385 FOXA1 JASPAR yes 2661153
chr3 57972370 57972390 RREB1 JASPAR yes 2661154
chr3 57972371 57972383 FOXI1 JASPAR yes 2661155
chr3 57972371 57972386 FOXP1 JASPAR yes 2661156
chr3 57972372 57972384 FOXC2 JASPAR yes 2661157
chr3 57972374 57972385 FOXA1 JASPAR yes 2661158
chr3 57972375 57972390 FOXP1 JASPAR yes 2661159
Genes associated with rs79209499[chr3:57972378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More