EnhancerDB
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  3. rs79222945[chr1:206893476]
Enhancers that have rs79222945[chr1:206893476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs79222945[chr1:206893476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206891402 206893954 ZNF274 GTRD no Cervix (HeLa-S3) 21372554
chr1 206891402 206893954 ZNF274 GTRD no Cervix (HeLa-S3) 107863380
chr1 206891685 206893943 TEF1 GTRD no Bone (Osteoblast) 21372555
chr1 206891685 206893943 TEF1 GTRD no Bone (Osteoblast) 107863381
chr1 206892133 206893635 ZNF274 GTRD no Cervix (HeLa-S3) 21372557
chr1 206892133 206893635 ZNF274 GTRD no Cervix (HeLa-S3) 107863383
chr1 206892235 206893501 AR GTRD no Prostate (PC-3) 21372558
chr1 206892235 206893501 AR GTRD no Prostate (PC-3) 107863384
chr1 206893471 206893477 ETS1 JASPAR yes 34822117
chr1 206893471 206893483 ELF1 JASPAR yes 34822118
chr1 206893473 206893482 ELK4 JASPAR yes 34822119
chr1 206893473 206893483 ELK1 JASPAR yes 34822120
chr1 206893473 206893483 ERG JASPAR yes 34822121
chr1 206893473 206893483 ETV5 JASPAR yes 34822122
chr1 206893473 206893483 FEV JASPAR yes 34822123
chr1 206893473 206893483 FLI1 JASPAR yes 34822124
chr1 206893473 206893484 ELK4 JASPAR yes 34822125
chr1 206893475 206893481 ETS1 JASPAR yes 34822126
chr1 206893475 206893481 SPI1 JASPAR yes 34822127
Genes associated with rs79222945[chr1:206893476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 206136916 206155151 + FAM72A ENSG00000196550.6 206136916 738325 Thyroid 0.0590362 1775