EnhancerDB
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  3. rs79263340[chr1:17892657]
Enhancers that have rs79263340[chr1:17892657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs79263340[chr1:17892657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17892643 17892658 HNF4A JASPAR yes 27102616
chr1 17892644 17892658 RXRG JASPAR yes 27102617
chr1 17892644 17892659 HNF4G JASPAR yes 27102618
chr1 17892644 17892659 NR2C2 JASPAR yes 27102619
chr1 17892656 17892667 NFKB1 JASPAR yes 27102620
Genes associated with rs79263340[chr1:17892657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More