EnhancerDB
  1. Home
  2. SNP
  3. rs79280879[chr2:69135641]
Enhancers that have rs79280879[chr2:69135641]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69131784 69143115 enh5635
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr2 69135600 69135857 vista31940
VISTA
Transcript factors that have rs79280879[chr2:69135641]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69135264 69136218 POLR2A UCSC Txn Factor no Conserved 108432859
chr2 69135533 69135687 POU2F2 UCSC Txn Factor no Conserved 108432860
chr2 69135535 69135892 STAT1 UCSC Txn Factor no Conserved 108432861
chr2 69135581 69135848 SRF UCSC Txn Factor no Conserved 108432862
chr2 69135622 69135942 BACH1 UCSC Txn Factor no Conserved 108432863
chr2 69135626 69135946 MAFK UCSC Txn Factor no Conserved 108432864
chr2 69135640 69135651 E2F6 JASPAR yes 22077247
chr2 69135640 69135651 E2F6 JASPAR yes 74807101
Genes associated with rs79280879[chr2:69135641], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More