EnhancerDB
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  3. rs79340222[chr1:229271978]
Enhancers that have rs79340222[chr1:229271978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs79340222[chr1:229271978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229269674 229274777 ZNF274 GTRD no Liver (HepG2) 21390264
chr1 229270302 229272010 ZNF274 GTRD no Liver (HepG2) 21390272
chr1 229270321 229274409 ZNF274 GTRD no Liver (HepG2) 21390273
chr1 229270369 229272013 ZNF274 GTRD no Liver (HepG2) 21390282
chr1 229270398 229272460 ZNF274 GTRD no Liver (HepG2) 21390285
chr1 229270432 229272516 ZNF143 GTRD no Epithelial (MCF-7) 21390298
chr1 229270437 229272505 ZNF143 GTRD no Epithelial (MCF-7) 21390302
chr1 229270443 229272187 ZNF274 GTRD no Liver (HepG2) 21390303
chr1 229270609 229272451 ZNF143 GTRD no Epithelial (MCF-7) 21390315
chr1 229270645 229272187 ZBTB33 GTRD no Brain (SK-N-SH) 21390320
chr1 229270795 229272152 ZNF143 GTRD no Epithelial (MCF-7) 21390333
chr1 229270849 229272122 ZNF143 GTRD no Epithelial (MCF-7) 21390340
chr1 229270946 229272078 ZNF274 GTRD no Cervix (HeLa-S3) 21390349
chr1 229271334 229272295 ZNF274 GTRD no Liver (HepG2) 21390356
chr1 229271395 229272278 ZNF143 GTRD no Epithelial (MCF-7) 21390358
chr1 229271396 229272036 ZNF143 GTRD no Epithelial (MCF-7) 21390359
chr1 229271412 229274512 AR GTRD no Prostate (PC-3) 21390361
chr1 229271425 229272165 ZNF274 GTRD no Cervix (HeLa-S3) 21390362
chr1 229271430 229272021 ZNF274 GTRD no Cervix (HeLa-S3) 21390363
chr1 229271444 229272464 ZNF274 GTRD no Liver (HepG2) 21390365
chr1 229271452 229273415 ZNF274 GTRD no Liver (HepG2) 21390366
chr1 229271453 229272660 ZNF274 GTRD no Liver (HepG2) 21390368
chr1 229271458 229272159 ZNF274 GTRD no Cervix (HeLa-S3) 21390369
chr1 229271487 229272070 ZNF143 GTRD no Epithelial (MCF-7) 21390370
chr1 229271546 229272060 ZNF274 GTRD no Liver (HepG2) 21390374
chr1 229271693 229272077 ZNF143 GTRD no Epithelial (MCF-7) 21390377
chr1 229271829 229272362 ZNF274 GTRD no Liver (HepG2) 21390378
chr1 229271908 229272168 ZNF274 GTRD no Liver (HepG2) 21390379
chr1 229271971 229271986 HNF4G JASPAR yes 35965476
chr1 229271976 229271982 SOX10 JASPAR yes 35965477
chr1 229271978 229271996 SRF JASPAR yes 35965478
Genes associated with rs79340222[chr1:229271978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More