EnhancerDB
  1. Home
  2. SNP
  3. rs79341080[chr1:225644664]
Enhancers that have rs79341080[chr1:225644664]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79341080[chr1:225644664]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225644634 225645254 TEF1 GTRD no Bone (Osteoblast) 21384796
chr1 225644659 225644673 ZIC1 JASPAR yes 35742685
Genes associated with rs79341080[chr1:225644664], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More