EnhancerDB
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  3. rs79342449[chr17:55486849]
Enhancers that have rs79342449[chr17:55486849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79342449[chr17:55486849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55486838 55486859 IRF1 JASPAR yes 54951952
chr17 55486842 55486863 ZNF263 JASPAR yes 54951953
chr17 55486847 55486851 YY1 TRANSFAC yes 54951954
Genes associated with rs79342449[chr17:55486849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More