EnhancerDB
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  3. rs79345034[chr1:205343628]
Enhancers that have rs79345034[chr1:205343628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205338025 205348135 enh27435
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs79345034[chr1:205343628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205342830 205344627 TCF7L2 GTRD no Colon (HCT116) 21371806
chr1 205342848 205344516 TCF7L2 GTRD no Colon (HCT116) 21371807
chr1 205343125 205344618 TCF7L2 GTRD no Colon (HCT116) 21371808
chr1 205343177 205344022 TCF7L2 GTRD no Colon (HCT116) 21371809
chr1 205343194 205343995 TCF7L2 GTRD no Colon (HCT116) 21371810
chr1 205343250 205343634 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371812
chr1 205343277 205344475 TCF7L2 GTRD no Colon (HCT116) 21371813
chr1 205343420 205344236 TCF7L2 GTRD no Colon (HCT116) 21371814
chr1 205343459 205344594 TCF7L2 GTRD no Colon (HCT116) 21371815
chr1 205343521 205344273 TCF7L2 GTRD no Colon (HCT116) 21371816
chr1 205343541 205344019 TCF7L2 GTRD no Colon (HCT116) 21371817
chr1 205343618 205343639 IRF1 JASPAR yes 34757136
chr1 205343620 205343635 IRF9 JASPAR yes 34757138
chr1 205343621 205343635 IRF7 JASPAR yes 34757139
chr1 205343621 205343635 IRF8 JASPAR yes 34757140
chr1 205343623 205343635 IRF1 JASPAR yes 34757141
chr1 205343626 205343631 MYB TRANSFAC yes 34757142
Genes associated with rs79345034[chr1:205343628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More