EnhancerDB
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  3. rs79390406[chr1:203492038]
Enhancers that have rs79390406[chr1:203492038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79390406[chr1:203492038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203491557 203493112 ZNF143 GTRD no Epithelial (MCF-7) 21369215
chr1 203491703 203492527 ZNF143 GTRD no Epithelial (MCF-7) 21369216
chr1 203492022 203492041 REST JASPAR yes 34635205
chr1 203492033 203492043 FIGLA JASPAR yes 34635206
chr1 203492033 203492044 USF2 JASPAR yes 34635207
Genes associated with rs79390406[chr1:203492038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More