EnhancerDB
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  3. rs79404435[chr6:25177900]
Enhancers that have rs79404435[chr6:25177900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 25177828 25178052 vista51375
VISTA
Transcript factors that have rs79404435[chr6:25177900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25177889 25177904 NFYB JASPAR yes 70336744
chr6 25177889 25177904 NFYB JASPAR yes 100832066
chr6 25177891 25177907 NFYA JASPAR yes 70336745
chr6 25177891 25177907 NFYA JASPAR yes 100832067
chr6 25177892 25177910 NFYA JASPAR yes 70336746
chr6 25177892 25177910 NFYA JASPAR yes 100832068
chr6 25177893 25177905 PBX1 JASPAR yes 70336747
chr6 25177893 25177905 PBX1 JASPAR yes 100832069
chr6 25177896 25177900 H1TF2 TRANSFAC yes 70336748
chr6 25177896 25177900 NFE TRANSFAC yes 70336749
chr6 25177896 25177900 SRF TRANSFAC yes 70336750
chr6 25177896 25177900 H1TF2 TRANSFAC yes 100832070
chr6 25177896 25177900 NFE TRANSFAC yes 100832071
chr6 25177896 25177900 SRF TRANSFAC yes 100832072
Genes associated with rs79404435[chr6:25177900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More