EnhancerDB
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  3. rs79425113[chr17:40403209]
Enhancers that have rs79425113[chr17:40403209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs79425113[chr17:40403209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40403206 40403220 ONECUT1 JASPAR yes 54289600
chr17 40403206 40403220 ONECUT3 JASPAR yes 54289601
chr17 40403207 40403220 DUXA JASPAR yes 54289602
chr17 40403208 40403219 DUX4 JASPAR yes 54289603
chr17 40403209 40403219 PAX3 JASPAR yes 54289604
chr17 40403209 40403219 PAX7 JASPAR yes 54289605
chr17 40403209 40403221 PBX1 JASPAR yes 54289606
Genes associated with rs79425113[chr17:40403209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More