EnhancerDB
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  3. rs79438142[chr11:125952466]
Enhancers that have rs79438142[chr11:125952466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 125947265 125956175 enh47535
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Blood (T-cell) Stomach Peripheral Blood (MM.1S) Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs79438142[chr11:125952466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 125952304 125952904 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21521123
chr11 125952356 125953150 ZNF143 GTRD no Epithelial (MCF-7) 21521124
chr11 125952387 125952603 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21521125
chr11 125952392 125952656 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21521126
chr11 125952439 125953155 ZNF143 GTRD no Epithelial (MCF-7) 21521127
chr11 125952444 125952908 ZNF143 GTRD no Epithelial (MCF-7) 21521128
chr11 125952458 125952470 NHLH1 JASPAR yes 42173692
chr11 125952459 125952469 MSC JASPAR yes 42173693
chr11 125952459 125952469 NHLH1 JASPAR yes 42173694
chr11 125952459 125952469 TFAP4 JASPAR yes 42173695
chr11 125952460 125952473 SCRT2 JASPAR yes 42173696
Genes associated with rs79438142[chr11:125952466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More