EnhancerDB
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  3. rs79544150[chr12:125173560]
Enhancers that have rs79544150[chr12:125173560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79544150[chr12:125173560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125172987 125173702 TCF7L2 GTRD no Colon (HCT116) 21581734
chr12 125173048 125173578 TCF7L2 GTRD no Colon (HCT116) 21581736
chr12 125173097 125173616 ZNF143 GTRD no Epithelial (MCF-7) 21581737
chr12 125173119 125173569 TCF7L2 GTRD no Colon (HCT116) 21581738
chr12 125173161 125173740 TCF7L2 GTRD no Colon (HCT116) 21581740
chr12 125173548 125173563 STAT1 JASPAR yes 124409064
chr12 125173550 125173561 STAT1 JASPAR yes 124409065
Genes associated with rs79544150[chr12:125173560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More