EnhancerDB
  1. Home
  2. SNP
  3. rs79546075[chr17:75384227]
Enhancers that have rs79546075[chr17:75384227]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79546075[chr17:75384227]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 21790292
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 108298568
chr17 75382725 75385911 ZNF143 GTRD no Epithelial (MCF-7) 108298569
chr17 75384227 75384246 RFX2 JASPAR yes 56075790
Genes associated with rs79546075[chr17:75384227], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More