EnhancerDB
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  3. rs79551215[chr13:111059285]
Enhancers that have rs79551215[chr13:111059285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111037685 111076655 enh15498
Brain (SK-N-MC) Liver Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79551215[chr13:111059285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111059282 111059297 TFAP2C JASPAR yes 60348981
chr13 111059284 111059296 TFAP2A JASPAR yes 60348982
chr13 111059284 111059296 TFAP2B JASPAR yes 60348983
chr13 111059284 111059296 TFAP2C JASPAR yes 60348984
chr13 111059284 111059297 TFAP2A JASPAR yes 60348985
chr13 111059284 111059297 TFAP2B JASPAR yes 60348986
chr13 111059284 111059297 TFAP2C JASPAR yes 60348987
Genes associated with rs79551215[chr13:111059285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr13 111521578 111522162 - LINC00346 ENSG00000255874.1 111522162 462293 Spleen 0.451682 13025