EnhancerDB
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  3. rs7958522[chr12:52595006]
Enhancers that have rs7958522[chr12:52595006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7958522[chr12:52595006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52594853 52595031 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546612
chr12 52594996 52595009 NFKB1 JASPAR yes 120927076
chr12 52594997 52595008 NFKB1 JASPAR yes 120927077
chr12 52594998 52595008 NFKB1 JASPAR yes 120927078
chr12 52594998 52595008 RELA JASPAR yes 120927079
chr12 52595000 52595014 GLIS2 JASPAR yes 120927080
chr12 52595000 52595015 ZIC4 JASPAR yes 120927081
Genes associated with rs7958522[chr12:52595006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More