EnhancerDB
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  3. rs796088294[chr17:25875255]
Enhancers that have rs796088294[chr17:25875255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs796088294[chr17:25875255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25875246 25875266 RREB1 JASPAR yes 53644095
chr17 25875252 25875267 FOXP1 JASPAR yes 53644096
chr17 25875253 25875268 FOXP1 JASPAR yes 53644097
chr17 25875254 25875269 FOXP1 JASPAR yes 53644098
chr17 25875255 25875270 FOXP1 JASPAR yes 53644099
chr17 25875255 25875276 IRF1 JASPAR yes 53644100
Genes associated with rs796088294[chr17:25875255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More